Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906584.1_cds_XP_016456730.1_50537
CDS Infomation

[gene=LOC107780679] [db_xref=GeneID:107780679] [protein=uncharacterized protein LOC107780679 isoform X2] [protein_id=XP_016456730.1] [location=complement(join(9194..9265,10842..11095,11371..13141,13227..13304))] [gbkey=CDS]
Sequence

ATGGAACCCATCTTTAGGTCAGAGATTATGTCAGGAACTGAAACTAACATAGAAGATGTC
TTCCTTGTCTATTCTCATGCCCATAAGTTGATAAGCCTGTGTGGATGGGAGCCAAGATGG
CTTCCAAATATTCAAGACTGTGAAGAACATTCTGCTCAATCAGCTAGGAGTGGGTACTCC
ATTGGTCCCACAAAATATCACACTTCTTTGCAAGATTTTGGCCATGGTGAAAATGTATTA
CCTGCTTCAAAGAAAAAAAATTCTAGTAAGAACAAAGCTGTGGGTACCAGGTCTACTAAA
GGTGAATCTCGGTCACCTTTGTTGGATTGTAGCTTGTGTGGAGCCACTGTGAGAATCTGG
GATTTCCTTACTGTTGTCCGTCCTGCTTGCTTTGCTCCAAATACCAATGATATCCCTGAG
ACAAGCAAGAAGATGGCATTGACACGTGGAGTAAGTGCTGCTAGTGGAATCAGTGGATGG
GTTGCTGCTGATGGCATGGGAAAGGAGCAGACAGAGGACCTTGATGAAGCTGCAACAACT
GAAGAGGGAAGGTCTTTGTCAAATATAGGAGTAGATCTGAATCTCACAATGGCTGGTGGA
TTATCCTCTTCACAGGTGAACATGGATGTGAGGCCGGAACAATTTCAAGATGTCCATAAA
CGAAGACATCCAATTATTGGTCAACCTTCAAGCAGTGAGGTTGGTGGTCATGCAGCTTCA
TATGAATCGCGAGGCCCTAGTTCTCGCAAACGAAACTTAGAGGAAGGTGGAAGCACAGTT
GATAGGCCACAATTGCCGGTACAGCCGGCCGATAGTGTTGAAGGCACTGTAATAGACCGT
GATGGAGATGAAGTAAATGATGGTAGTCAGTACTCAGCTGGCCCATCAAAGCGTGCATGC
CAGTCTGATGCCTTTGGGCCCCAGCTTACCTCATATGGCAAGGATTCATCAGGTGCTGGT
CCTAGCCTCTCGCTTGGTTTTGAGATTGGCAGAGATGCTTCCAGAGATGATACCTTTGGA
CGAGGGCAGGAACAGCTAACTGGTATGCCATCTACTCGAGACTCGACACATGTTTCATCT
GTTATTGCAATGGACACTGTTCACAGTGCAGATGATGATTCAATGGAAAGTGTTGAGAAT
CTCCCAGGAGACTTTGATGATGTTAATTTCCCTTCAACATCTATGTTAAGAAGTGCAGAT
CCAGTGGAAACTTCAGAATTGAACTACAGTAATCAAGCGCAACAGAGTACTTGTCCAGCT
GTGGTCAGAAGTGCTGGTGAAATGGGTGTTAGTAGCACCAATGATGAAGAAGTAGTGAAT
GCAGATACTGCCACTGGCAATGTGAGGGATGGCCCTAGCGTCGGGATCAGTGGAGGAAGT
ATTGGAATGGGTGCTAGTCATGAAGCTGAAATCCATGGGACAGATGCTTCTGTGCACAGA
GCAGATAGTGTCGCTGGTGATGTAGAAGCAGTTGCTGAAATTACGGAAAATCAGGGGCAA
ACAGGTGAATTTGCTCCAGACCCCGGACTAATGGGTGACTATGTTCCTGAAGAAGTGGAC
CGAGTTGATCCTAATGGTGATAGTCAAGATCTGACATCTCGTTCTGTGGGAAGGGCTGAT
AGTGGCTCAAAAATTGTTGGCTCAGCCAAAGCAGAATCCATTGAAAGTGGTGAAAGGACT
CGTCACATGCAGCCTACACTTCCGAATAGTCCACACCCTTCTCTTTCTTGTAATGCTGTT
GTATATTCTGCATATGAAGCATCCAAGGATGAAGTAACCCAAAATAATGCACCAGCTACT
GATGATTGTGGATTCTTCGAGTCAGGCTATATGCTTGCGAACGGGACAGGGCCTCCTATT
GGAGAAAGCAACTATGACGAAGCTGTTGAATTTGATCCAATTAAACATCATAATTTTTTC
TGTCCTTGGGTAAATGGAAATGTTGCTGCTGCTGGCTGCAGTAGTGGCAGTTCCTCTTCC
AATGCTGGCGCTATTGCTCTCTGTGGTTGGCAGCTGACGTTAGATGCTTTGGATTCTTTC
CAGTCACTCGGACATGTTCCAGTCCAAACTGTTGAATCTGAATCAGCTGCATCTCTGTAT
AAGGATGATCATCGTGCAACAGGTAGGAAACTCTTGGCACACCACTCTTTTAGCAAACGT
CATGGGCAAAACTGA

Peptide Sequence

PEP ID

XP_016456730.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107780679 isoform X2 [Nicotiana tabacum]
Sequence

MEPIFRSEIMSGTETNIEDVFLVYSHAHKLISLCGWEPRWLPNIQDCEEHSAQSARSGYS
IGPTKYHTSLQDFGHGENVLPASKKKNSSKNKAVGTRSTKGESRSPLLDCSLCGATVRIW
DFLTVVRPACFAPNTNDIPETSKKMALTRGVSAASGISGWVAADGMGKEQTEDLDEAATT
EEGRSLSNIGVDLNLTMAGGLSSSQVNMDVRPEQFQDVHKRRHPIIGQPSSSEVGGHAAS
YESRGPSSRKRNLEEGGSTVDRPQLPVQPADSVEGTVIDRDGDEVNDGSQYSAGPSKRAC
QSDAFGPQLTSYGKDSSGAGPSLSLGFEIGRDASRDDTFGRGQEQLTGMPSTRDSTHVSS
VIAMDTVHSADDDSMESVENLPGDFDDVNFPSTSMLRSADPVETSELNYSNQAQQSTCPA
VVRSAGEMGVSSTNDEEVVNADTATGNVRDGPSVGISGGSIGMGASHEAEIHGTDASVHR
ADSVAGDVEAVAEITENQGQTGEFAPDPGLMGDYVPEEVDRVDPNGDSQDLTSRSVGRAD
SGSKIVGSAKAESIESGERTRHMQPTLPNSPHPSLSCNAVVYSAYEASKDEVTQNNAPAT
DDCGFFESGYMLANGTGPPIGESNYDEAVEFDPIKHHNFFCPWVNGNVAAAGCSSGSSSS
NAGAIALCGWQLTLDALDSFQSLGHVPVQTVESESAASLYKDDHRATGRKLLAHHSFSKR
HGQN

Transcript Sequence

Gene sequence data has not been registered.